Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine/o-acetylserine efflux protein | C9Z06_06320 | Not Available | Negative | 1283528 - 1284115 | 21249.5 |
| lysr family transcriptional regulator | C9Z06_06325 | Not Available | Positive | 1284218 - 1285099 | 33287.2 |
| atp-dependent rna helicase srmb | C9Z06_06330 | Not Available | Negative | 1285308 - 1286642 | 49901.0 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase | C9Z06_06335 | Not Available | Positive | 1286774 - 1287511 | 27209.4 |
| l-aspartate oxidase | C9Z06_06340 | Not Available | Negative | 1287496 - 1289118 | 60172.6 |
| rpoe leader peptide rsed | C9Z06_06345 | Not Available | Positive | 1289374 - 1289529 | 6229.83 |
| ecf rna polymerase sigma-e factor | C9Z06_06350 | Not Available | Positive | 1289526 - 1290101 | 21697.0 |
| anti-sigma-e factor rsea | C9Z06_06355 | Not Available | Positive | 1290134 - 1290784 | 24322.8 |
| sigma-e factor regulatory protein rseb | C9Z06_06360 | Not Available | Positive | 1290784 - 1291740 | 35751.8 |
| soxr reducing system protein rsec | C9Z06_06365 | Not Available | Positive | 1291737 - 1292216 | 16626.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





