Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ai-2e family transporter ydik | C9Z06_05750 | Not Available | Positive | 1172133 - 1173245 | 39843.7 |
| duf1870 family protein | C9Z06_05760 | Not Available | Positive | 1173674 - 1174030 | 13882.5 |
| mfs transporter | C9Z06_05765 | Not Available | Positive | 1174130 - 1175344 | 44637.7 |
| mfs transporter | C9Z06_05770 | Not Available | Positive | 1175571 - 1176836 | 46067.0 |
| quinate/shikimate dehydrogenase | C9Z06_05775 | Not Available | Positive | 1176848 - 1177714 | 31243.7 |
| 3-dehydroquinase | C9Z06_05780 | Not Available | Positive | 1177745 - 1178503 | 27551.4 |
| acetate coa-transferase ydif | C9Z06_05785 | Not Available | Positive | 1178647 - 1180242 | 57530.6 |
| acyl-coa dehydrogenase | C9Z06_05790 | Not Available | Positive | 1180256 - 1181407 | 43004.6 |
| arac family transcriptional regulator | C9Z06_05795 | Not Available | Negative | 1181450 - 1182361 | 34922.4 |
| electron transfer flavoprotein | C9Z06_05800 | Not Available | Positive | 1182677 - 1183441 | 27429.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





