Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4102 domain-containing protein | C9Z06_05295 | Not Available | Negative | 1076044 - 1077122 | 41369.2 |
| hypothetical protein | C9Z06_05300 | Not Available | Positive | 1077110 - 1077292 | 6991.45 |
| re/si-specific nad(p)(+) transhydrogenase subunit beta | C9Z06_05310 | Not Available | Negative | 1078229 - 1079617 | 48726.0 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | C9Z06_05315 | Not Available | Negative | 1079628 - 1081160 | 54560.5 |
| duf1471 domain-containing protein | C9Z06_05320 | Not Available | Positive | 1081684 - 1082628 | 33874.9 |
| amino acid permease | C9Z06_05325 | Not Available | Positive | 1082814 - 1084196 | 49504.5 |
| dihydrofolate reductase folm | C9Z06_05330 | Not Available | Positive | 1084233 - 1084955 | 26319.8 |
| glpm family protein | C9Z06_05335 | Not Available | Negative | 1084952 - 1085287 | 12323.8 |
| two-component system response regulator rsta | C9Z06_05340 | Not Available | Positive | 1085416 - 1086135 | 26668.3 |
| two-component system sensor histidine kinase rstb | C9Z06_05345 | Not Available | Positive | 1086139 - 1087440 | 49305.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





