Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldolase | C9Z06_04890 | Not Available | Negative | 993023 - 993493 | 16673.9 |
| nicotinamide mononucleotide deamidase-related protein yfay | C9Z06_04895 | Not Available | Negative | 993548 - 994750 | 44246.3 |
| hypothetical protein | C9Z06_04900 | Not Available | Negative | 994850 - 995392 | 18596.8 |
| nucleoside triphosphatase nudi | C9Z06_04905 | Not Available | Positive | 995671 - 996096 | 16361.6 |
| histidine phosphatase family protein | C9Z06_04910 | Not Available | Negative | 996135 - 996737 | 22290.8 |
| udp-4-amino-4-deoxy-l-arabinose-oxoglutarate aminotransferase | C9Z06_04915 | Not Available | Positive | 997045 - 998184 | 41644.2 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | C9Z06_04920 | Not Available | Positive | 998188 - 999156 | 36357.3 |
| bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arna | C9Z06_04925 | Not Available | Positive | 999156 - 1001138 | 74234.0 |
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase arnd | C9Z06_04930 | Not Available | Positive | 1001135 - 1002025 | 33143.7 |
| lipid iv(a) 4-amino-4-deoxy-l-arabinosyltransferase | C9Z06_04935 | Not Available | Positive | 1002025 - 1003677 | 62546.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





