Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin-type protein napf | C9Z06_04735 | Not Available | Negative | 946102 - 946596 | 18048.3 |
| ecotin | C9Z06_04740 | Not Available | Positive | 947004 - 947492 | 18166.0 |
| malate:quinone oxidoreductase | C9Z06_04745 | Not Available | Negative | 947641 - 949287 | 60248.1 |
| microcin j25 efflux abc transporter yoji | C9Z06_04750 | Not Available | Negative | 949505 - 951148 | 61572.4 |
| dna oxidative demethylase alkb | C9Z06_04755 | Not Available | Negative | 951224 - 951874 | 24002.7 |
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | C9Z06_04760 | Not Available | Negative | 951874 - 952938 | 39321.0 |
| fad:protein fmn transferase apbe | C9Z06_04765 | Not Available | Negative | 953012 - 954067 | 38609.0 |
| porin ompc | C9Z06_04770 | Not Available | Negative | 954179 - 955303 | 41236.3 |
| phosphotransferase rcsd | C9Z06_04775 | Not Available | Positive | 956042 - 958714 | 100337.0 |
| transcriptional regulator rcsb | C9Z06_04780 | Not Available | Positive | 958731 - 959381 | 23672.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





