Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional murein dd-endopeptidase/murein ld-carboxypeptidase | C9Z06_04580 | Not Available | Positive | 914452 - 915018 | 21069.2 |
| cyclic di-gmp phosphodiesterase | C9Z06_04585 | Not Available | Positive | 915199 - 916755 | 58531.4 |
| abc transporter substrate-binding protein | C9Z06_04590 | Not Available | Positive | 916837 - 918651 | 69767.7 |
| microcin c abc transporter permease yejb | C9Z06_04595 | Not Available | Positive | 918652 - 919746 | 40376.7 |
| abc transporter permease | C9Z06_04600 | Not Available | Positive | 919746 - 920771 | 38094.6 |
| abc transporter atp-binding protein | C9Z06_04605 | Not Available | Positive | 920773 - 922362 | 58715.8 |
| hypothetical protein | C9Z06_04610 | Not Available | Negative | 922366 - 922710 | 12525.9 |
| bcr/cfla family multidrug efflux mfs transporter | C9Z06_04615 | Not Available | Negative | 923043 - 924233 | 43341.4 |
| 16s rrna pseudouridine(516) synthase rsua | C9Z06_04620 | Not Available | Negative | 924261 - 924956 | 25866.8 |
| dead/deah box helicase | C9Z06_04625 | Not Available | Positive | 925105 - 926865 | 66618.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





