Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine-specific permease | C9Z06_04480 | Not Available | Negative | 891585 - 893054 | 53579.0 |
| lysr family transcriptional regulator | C9Z06_04485 | Not Available | Negative | 893259 - 894140 | 32725.7 |
| yeih family protein | C9Z06_04490 | Not Available | Positive | 894239 - 895288 | 36884.3 |
| endonuclease | C9Z06_04495 | Not Available | Positive | 895362 - 896219 | 31493.3 |
| sugar kinase | C9Z06_04500 | Not Available | Positive | 896223 - 897311 | 40159.1 |
| nupc/nupg family nucleoside cnt transporter | C9Z06_04505 | Not Available | Negative | 897367 - 898617 | 43310.2 |
| ribosylpyrimidine nucleosidase | C9Z06_04510 | Not Available | Negative | 898717 - 899658 | 33812.1 |
| transcriptional regulator yeil | C9Z06_04515 | Not Available | Positive | 899788 - 900486 | 26889.6 |
| nupc/nupg family nucleoside cnt transporter | C9Z06_04520 | Not Available | Negative | 900557 - 901807 | 43434.4 |
| pseudouridine-5'-phosphate glycosidase | C9Z06_04525 | Not Available | Negative | 901901 - 902839 | 32909.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





