Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| entericidin a | C9Z06_04375 | Not Available | Negative | 870560 - 870685 | 4359.48 |
| elongation factor p | C9Z06_04380 | Not Available | Negative | 870737 - 871303 | 20592.4 |
| ef-p beta-lysylation protein epmb | C9Z06_04385 | Not Available | Positive | 871345 - 872373 | 38708.8 |
| hypothetical protein | C9Z06_04390 | Not Available | Positive | 872763 - 873632 | 33031.0 |
| trna dihydrouridine(16) synthase dusc | C9Z06_04395 | Not Available | Negative | 874008 - 874955 | 35143.5 |
| hypothetical protein | C9Z06_04400 | Not Available | Positive | 875194 - 875592 | 14593.6 |
| cidb/lrgb family autolysis modulator | C9Z06_04405 | Not Available | Positive | 875589 - 876284 | 24471.1 |
| cytidine deaminase | C9Z06_04410 | Not Available | Positive | 876414 - 877298 | 31527.5 |
| protein sana | C9Z06_04415 | Not Available | Positive | 877448 - 878167 | 27288.5 |
| duf2542 family protein | C9Z06_04420 | Not Available | Positive | 878170 - 878409 | 9264.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





