Escherichia coli strain FWSEC0052

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0052 is a Gram-negative, rod-shaped bacterium characterized as a facultative anaerobe, capable of thriving in both aerobic and anaerobic environments. This strain exhibits mobility due to the presence of flagella and typically arranges itself in pairs or singles. It is mesophilic, with an optimal growth temperature of 37°C. FWSEC0052 is primarily host-associated, demonstrating a complex biotic relationship with a wide variety of hosts, including Homo sapiens, Gallus gallus, and various mammals, birds, and even some plants. This broad host range suggests that FWSEC0052 can adapt to diverse biological environments, enhancing its survival and proliferation. In terms of health effects, FWSEC0052 is linked to numerous clinical conditions in humans, most notably urinary tract infections (UTIs), gastrointestinal infections, and neonatal meningitis. It is also associated with severe health issues such as hemolytic uremic syndrome (HUS), septicemia, and various forms of colitis. These pathogenic traits indicate its significant impact on human health, leading to conditions ranging from mild diarrhea to life-threatening complications. The presence of FWSEC0052 in various hosts and its potential to cause serious infections underline its ecological and medical importance. Its adaptability to different environments and hosts may facilitate the transmission of virulence factors, further complicating public health efforts to manage infections associated with this strain. Understanding its interactions with diverse hosts can provide insights into its pathogenic mechanisms and inform strategies for prevention and treatment of associated diseases.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0052

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0052
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0052 plasmid unnamed9

Gene Summary

Adenine Count

1335687 bp

Thymine Count

1337063 bp

Guanine Count

1364220 bp

Cytosine Count

1364208 bp

Genome Length

5415583 bp

Protein-coding Genes

4946 genes

Non-Coding Genes

411 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
zinc transporter zitbC9Z03_21005Not AvailablePositive4311295 - 431223634680.5
nicotinamide riboside transporter pnucC9Z03_21010Not AvailableNegative4312233 - 431295226970.8
quinolinate synthase nadaC9Z03_21015Not AvailableNegative4312990 - 431403338258.9
elongation factor tuC9Z03_21020Not AvailablePositive4314325 - 43144223176.95
bacterioferritin-associated ferredoxinC9Z03_21025Not AvailablePositive4314605 - 43147997475.27
bacterioferritinC9Z03_21030Not AvailablePositive4314872 - 431534818353.1
prepilin peptidaseC9Z03_21035Not AvailableNegative4315345 - 431581216955.0
30s ribosomal protein s10C9Z03_21040Not AvailablePositive4316191 - 431650211736.3
50s ribosomal protein l3C9Z03_21045Not AvailablePositive4316535 - 431716422244.8
50s ribosomal protein l4C9Z03_21050Not AvailablePositive4317175 - 431778022087.8

Displaying genes 4261 – 4270 of 5363 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total