Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0052 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1335687 bp
Thymine Count
1337063 bp
Guanine Count
1364220 bp
Cytosine Count
1364208 bp
Genome Length
5415583 bp
Protein-coding Genes
4946 genes
Non-Coding Genes
411 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system-associated protein tago | C9Z03_19955 | Not Available | Negative | 4087128 - 4087871 | 26428.7 |
| type vi secretion system atpase tssh | C9Z03_19960 | Not Available | Negative | 4087868 - 4090657 | 101759.0 |
| dotu family type iv/vi secretion system protein | C9Z03_19965 | Not Available | Negative | 4090666 - 4091427 | 29391.7 |
| type vi secretion system baseplate subunit tssk | C9Z03_19970 | Not Available | Negative | 4091432 - 4092763 | 49995.9 |
| type vi secretion system lipoprotein tssj | C9Z03_19975 | Not Available | Negative | 4092766 - 4093290 | 19395.0 |
| type vi secretion system-associated fha domain protein tagh | C9Z03_19980 | Not Available | Negative | 4093287 - 4094567 | 47416.8 |
| type vi secretion system baseplate subunit tssg | C9Z03_19985 | Not Available | Negative | 4094592 - 4095674 | 40262.1 |
| type vi secretion system baseplate subunit tssf | C9Z03_19990 | Not Available | Negative | 4095638 - 4097488 | 71204.0 |
| type vi secretion system baseplate subunit tsse | C9Z03_19995 | Not Available | Negative | 4097492 - 4097905 | 15494.0 |
| type vi secretion system contractile sheath large subunit | C9Z03_20000 | Not Available | Negative | 4097912 - 4099387 | 55705.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





