Escherichia coli strain FWSEC0052

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0052 is a Gram-negative, rod-shaped bacterium characterized as a facultative anaerobe, capable of thriving in both aerobic and anaerobic environments. This strain exhibits mobility due to the presence of flagella and typically arranges itself in pairs or singles. It is mesophilic, with an optimal growth temperature of 37°C. FWSEC0052 is primarily host-associated, demonstrating a complex biotic relationship with a wide variety of hosts, including Homo sapiens, Gallus gallus, and various mammals, birds, and even some plants. This broad host range suggests that FWSEC0052 can adapt to diverse biological environments, enhancing its survival and proliferation. In terms of health effects, FWSEC0052 is linked to numerous clinical conditions in humans, most notably urinary tract infections (UTIs), gastrointestinal infections, and neonatal meningitis. It is also associated with severe health issues such as hemolytic uremic syndrome (HUS), septicemia, and various forms of colitis. These pathogenic traits indicate its significant impact on human health, leading to conditions ranging from mild diarrhea to life-threatening complications. The presence of FWSEC0052 in various hosts and its potential to cause serious infections underline its ecological and medical importance. Its adaptability to different environments and hosts may facilitate the transmission of virulence factors, further complicating public health efforts to manage infections associated with this strain. Understanding its interactions with diverse hosts can provide insights into its pathogenic mechanisms and inform strategies for prevention and treatment of associated diseases.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0052

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0052
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0052 plasmid unnamed9

Gene Summary

Adenine Count

1335687 bp

Thymine Count

1337063 bp

Guanine Count

1364220 bp

Cytosine Count

1364208 bp

Genome Length

5415583 bp

Protein-coding Genes

4946 genes

Non-Coding Genes

411 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ynbe family lipoproteinC9Z03_10095Not AvailableNegative2101345 - 21015306826.49
ydbh family proteinC9Z03_10100Not AvailableNegative2101527 - 210416696958.5
2-hydroxyacid dehydrogenaseC9Z03_10105Not AvailablePositive2104374 - 210536336522.8
heat shock protein hsljC9Z03_10110Not AvailablePositive2105474 - 210589615105.5
duf333 domain-containing proteinC9Z03_10115Not AvailableNegative2105893 - 21061598696.44
pyruvate:ferredoxin (flavodoxin) oxidoreductaseC9Z03_10120Not AvailablePositive2106433 - 2109957128857.0
porin ompnC9Z03_10125Not AvailablePositive2110324 - 211145741207.9
universal stress protein uspfC9Z03_10130Not AvailablePositive2111598 - 211203215959.4
trna 2-thiocytidine(32) synthetase ttcaC9Z03_10135Not AvailablePositive2112208 - 211314335461.8
atp-dependent rna helicase dbpaC9Z03_10140Not AvailableNegative2113272 - 211464549270.9

Displaying genes 2391 – 2400 of 5363 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total