Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0052 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1335687 bp
Thymine Count
1337063 bp
Guanine Count
1364220 bp
Cytosine Count
1364208 bp
Genome Length
5415583 bp
Protein-coding Genes
4946 genes
Non-Coding Genes
411 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | C9Z03_02985 | Not Available | Negative | 628153 - 628917 | 28171.7 |
| arabinose operon regulatory protein | C9Z03_02990 | Not Available | Negative | 629003 - 629881 | 33385.8 |
| ribulokinase | C9Z03_02995 | Not Available | Positive | 630220 - 631920 | 61131.7 |
| l-arabinose isomerase | C9Z03_03000 | Not Available | Positive | 631931 - 633433 | 56106.2 |
| l-ribulose-5-phosphate 4-epimerase | C9Z03_03005 | Not Available | Positive | 633602 - 634297 | 25548.4 |
| dna polymerase ii | C9Z03_03010 | Not Available | Positive | 634372 - 636723 | 90044.7 |
| rna polymerase-associated protein rapa | C9Z03_03015 | Not Available | Positive | 636888 - 639794 | 109789.0 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | C9Z03_03020 | Not Available | Positive | 639806 - 640465 | 24862.1 |
| co-chaperone djla | C9Z03_03025 | Not Available | Negative | 640582 - 641397 | 30567.2 |
| lps-assembly protein lptd | C9Z03_03030 | Not Available | Positive | 641652 - 644006 | 89675.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





