Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0047 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1206963 bp
Thymine Count
1208282 bp
Guanine Count
1246827 bp
Cytosine Count
1238367 bp
Genome Length
4908341 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
335 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| knotted carbamoyltransferase ygew | C9Y98_02400 | Not Available | Negative | 513954 - 515141 | 44057.7 |
| sigma-54-dependent fis family transcriptional regulator | C9Y98_02405 | Not Available | Positive | 515620 - 517398 | 66073.0 |
| xanthine dehydrogenase iron-sulfur-binding subunit | C9Y98_02410 | Not Available | Negative | 517438 - 517917 | 16922.7 |
| xanthine dehydrogenase fad-binding subunit xdhb | C9Y98_02415 | Not Available | Negative | 517914 - 518792 | 31558.6 |
| xanthine dehydrogenase molybdenum-binding subunit xdha | C9Y98_02420 | Not Available | Negative | 518803 - 521100 | 82663.0 |
| lysm peptidoglycan-binding domain-containing protein | C9Y98_02425 | Not Available | Positive | 521515 - 522270 | 26540.0 |
| Trna-gly | Not Available | Not Available | Positive | 522349 - 522422 | Not Available |
| hypothetical protein | C9Y98_02435 | Not Available | Positive | 522656 - 524266 | 60429.6 |
| hypothetical protein | C9Y98_02440 | Not Available | Positive | 524398 - 524763 | 13693.6 |
| yscq/hrcq family type iii secretion apparatus protein | C9Y98_02445 | Not Available | Positive | 524773 - 525345 | 21947.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





