Escherichia coli strain FWSEC0047

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0047 is a Gram-negative, rod-shaped bacterium that is facultatively anaerobic and possesses flagella, allowing for mobility. This strain is primarily host-associated and exhibits a biotic relationship as a free-living organism. It is mesophilic, with an optimal growth temperature of 37°C, and can thrive in a temperature range suitable for human and animal hosts. The strain has a diverse range of hosts, including Homo sapiens, various mammals such as Bos taurus and Sus scrofa, as well as non-mammalian species like Gallus gallus and Solanum lycopersicum. This suggests a broad ecological niche, allowing FWSEC0047 to adapt to multiple environments and interactions within various food webs. FWSEC0047 is associated with a wide array of health effects, particularly in humans. It is known to cause urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as septicemia and hemolytic uremic syndrome (HUS). The strain is also linked to neonatal infections and various gastrointestinal diseases, highlighting its pathogenic potential and impact on both human health and veterinary medicine. Given its broad host range and significant pathogenicity, E. coli strain FWSEC0047 exemplifies the dual role of microorganisms as both vital components of ecological systems and potential pathogens. This underscores the importance of monitoring and understanding such strains within clinical and environmental contexts to manage their health implications effectively.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0047

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0047
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0047 plasmid unnamed2

Gene Summary

Adenine Count

1206963 bp

Thymine Count

1208282 bp

Guanine Count

1246827 bp

Cytosine Count

1238367 bp

Genome Length

4908341 bp

Protein-coding Genes

4422 genes

Non-Coding Genes

335 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Repressor protein cC9Y98_13460Not AvailablePositive2807374 - 280766710558.7
AttrNot AvailableNot AvailablePositive2807584 - 2807595Not Available
IntegraseC9Y98_13465Not AvailablePositive2807737 - 280871737096.1
periplasmic protein cpxpC9Y98_13470Not AvailableNegative2808903 - 280940318966.4
Putative dna-binding response regulatorC9Y98_13475Not AvailablePositive2809553 - 281025126313.7
AttlNot AvailableNot AvailablePositive3215233 - 3215244Not Available
IntegraseC9Y98_15495Not AvailablePositive3227142 - 322840748432.1
duf4868 domain-containing proteinC9Y98_15500Not AvailableNegative3228466 - 322935934045.4
hypothetical proteinC9Y98_15505Not AvailableNegative3229368 - 322988319311.8
AttrNot AvailableNot AvailablePositive3229907 - 3229918Not Available

Displaying genes 161 – 170 of 4759 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total