Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0047 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1206963 bp
Thymine Count
1208282 bp
Guanine Count
1246827 bp
Cytosine Count
1238367 bp
Genome Length
4908341 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
335 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autoinducer 2 abc transporter substrate-binding protein | C9Y98_06620 | Not Available | Negative | 1405533 - 1406519 | 35671.3 |
| asch domain-containing protein | C9Y98_06625 | Not Available | Negative | 1406770 - 1407180 | 15171.0 |
| deaminase | C9Y98_06630 | Not Available | Negative | 1407479 - 1408861 | 50468.5 |
| carbamate kinase family protein | C9Y98_06635 | Not Available | Negative | 1408871 - 1409821 | 33960.9 |
| duf1116 domain-containing protein | C9Y98_06640 | Not Available | Negative | 1409964 - 1411382 | 50451.1 |
| acyl-coa synthetase fdra | C9Y98_06645 | Not Available | Negative | 1411382 - 1412929 | 55508.0 |
| duf2877 domain-containing protein | C9Y98_06650 | Not Available | Negative | 1412919 - 1413782 | 32309.7 |
| transcriptional regulator | C9Y98_06655 | Not Available | Negative | 1413822 - 1414427 | 21688.3 |
| duf1097 domain-containing protein | C9Y98_06660 | Not Available | Positive | 1414685 - 1415182 | 17328.1 |
| lysr family transcriptional regulator | C9Y98_06665 | Not Available | Positive | 1415274 - 1416206 | 34784.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





