Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0047 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1206963 bp
Thymine Count
1208282 bp
Guanine Count
1246827 bp
Cytosine Count
1238367 bp
Genome Length
4908341 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
335 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-2-oxovalerate aldolase | C9Y98_06475 | Not Available | Negative | 1371384 - 1372397 | 36472.6 |
| acetaldehyde dehydrogenase | C9Y98_06480 | Not Available | Negative | 1372394 - 1373344 | 33458.5 |
| 2-keto-4-pentenoate hydratase | C9Y98_06485 | Not Available | Negative | 1373341 - 1374150 | 28861.5 |
| 2-hydroxy-6-oxononadienedioate/2-hydroxy-6- oxononatrienedioate hydrolase | C9Y98_06490 | Not Available | Negative | 1374160 - 1375026 | 31939.3 |
| 2,3-dihydroxyphenylpropionate/2, 3-dihydroxicinnamic acid 1,2-dioxygenase | C9Y98_06495 | Not Available | Negative | 1375044 - 1375988 | 34228.0 |
| 3-(3-hydroxy-phenyl)propionate/3- hydroxycinnamic acid hydroxylase | C9Y98_06500 | Not Available | Negative | 1375990 - 1377654 | 62167.3 |
| dna-binding transcriptional activator mhpr | C9Y98_06505 | Not Available | Positive | 1377731 - 1378678 | 35522.3 |
| laci family dna-binding transcriptional regulator | C9Y98_06510 | Not Available | Positive | 1378755 - 1379837 | 38562.4 |
| beta-galactosidase | C9Y98_06515 | Not Available | Positive | 1379960 - 1383031 | 116299.0 |
| mfs transporter | C9Y98_06520 | Not Available | Positive | 1383083 - 1384336 | 46519.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





