Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0047 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1206963 bp
Thymine Count
1208282 bp
Guanine Count
1246827 bp
Cytosine Count
1238367 bp
Genome Length
4908341 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
335 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein yaia | C9Y98_06325 | Not Available | Negative | 1342116 - 1342307 | 7281.55 |
| shikimate kinase | C9Y98_06330 | Not Available | Negative | 1342357 - 1342881 | 19151.9 |
| yaii/yqxd family protein | C9Y98_06335 | Not Available | Negative | 1343064 - 1343522 | 16970.4 |
| pyrroline-5-carboxylate reductase | C9Y98_06340 | Not Available | Positive | 1343642 - 1344451 | 28146.6 |
| diguanylate cyclase adra | C9Y98_06345 | Not Available | Negative | 1344468 - 1345583 | 41530.9 |
| phosphate starvation-inducible protein psif | C9Y98_06350 | Not Available | Negative | 1345685 - 1346005 | 11687.2 |
| alkaline phosphatase | C9Y98_06355 | Not Available | Negative | 1346124 - 1347539 | 49411.3 |
| anti-adapter protein irap | C9Y98_06360 | Not Available | Negative | 1347640 - 1347900 | 9938.05 |
| d-alanine--d-alanine ligase a | C9Y98_06365 | Not Available | Positive | 1348363 - 1349457 | 39318.0 |
| duf2754 domain-containing protein | C9Y98_06370 | Not Available | Negative | 1349481 - 1349693 | 8097.92 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





