Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0047 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1206963 bp
Thymine Count
1208282 bp
Guanine Count
1246827 bp
Cytosine Count
1238367 bp
Genome Length
4908341 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
335 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | C9Y98_06170 | Not Available | Positive | 1309214 - 1311076 | 67606.9 |
| aldo/keto reductase | C9Y98_06175 | Not Available | Positive | 1311256 - 1312230 | 36521.3 |
| phosphatidylglycerophosphatase a | C9Y98_06180 | Not Available | Negative | 1312284 - 1312802 | 19419.2 |
| thiamine-phosphate kinase | C9Y98_06185 | Not Available | Negative | 1312780 - 1313757 | 35106.8 |
| transcription antitermination factor nusb | C9Y98_06190 | Not Available | Negative | 1313835 - 1314254 | 15689.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | C9Y98_06195 | Not Available | Negative | 1314274 - 1314744 | 16157.4 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | C9Y98_06200 | Not Available | Negative | 1314833 - 1315936 | 40375.7 |
| transcriptional regulator nrdr | C9Y98_06205 | Not Available | Negative | 1315940 - 1316389 | 17229.9 |
| duf3251 domain-containing protein | C9Y98_06210 | Not Available | Positive | 1316540 - 1317079 | 19633.6 |
| nucleoside-specific channel-forming protein tsx | C9Y98_06215 | Not Available | Positive | 1317378 - 1318262 | 33590.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





