Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0047 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1206963 bp
Thymine Count
1208282 bp
Guanine Count
1246827 bp
Cytosine Count
1238367 bp
Genome Length
4908341 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
335 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1778 domain-containing protein | C9Y98_06120 | Not Available | Positive | 1300489 - 1300800 | 11358.7 |
| gnat family n-acetyltransferase | C9Y98_06125 | Not Available | Positive | 1300784 - 1301326 | 19806.2 |
| sel1 repeat family protein | C9Y98_06130 | Not Available | Negative | 1301382 - 1302317 | 34655.4 |
| mfs transporter | C9Y98_06135 | Not Available | Positive | 1302725 - 1304089 | 48802.9 |
| yajq family cyclic di-gmp-binding protein | C9Y98_06140 | Not Available | Negative | 1304217 - 1304708 | 18344.9 |
| 2-dehydropantoate 2-reductase | C9Y98_06145 | Not Available | Positive | 1304876 - 1305787 | 33948.9 |
| protein deglycase yajl | C9Y98_06150 | Not Available | Positive | 1305750 - 1306340 | 20793.2 |
| trna 4-thiouridine(8) synthase thii | C9Y98_06155 | Not Available | Negative | 1306394 - 1307842 | 55018.4 |
| exodeoxyribonuclease 7 small subunit | C9Y98_06160 | Not Available | Positive | 1308048 - 1308290 | 8952.42 |
| (2e,6e)-farnesyl diphosphate synthase | C9Y98_06165 | Not Available | Positive | 1308290 - 1309189 | 32160.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





