Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0047 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1206963 bp
Thymine Count
1208282 bp
Guanine Count
1246827 bp
Cytosine Count
1238367 bp
Genome Length
4908341 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
335 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Holin | C9Y98_13360 | Not Available | Negative | 2792162 - 2792587 | 15554.6 |
| Endolysin | C9Y98_13365 | Not Available | Negative | 2792602 - 2793099 | 18539.1 |
| Holin | C9Y98_13370 | Not Available | Negative | 2793099 - 2793380 | 9818.63 |
| Tail protein | C9Y98_13375 | Not Available | Negative | 2793384 - 2793587 | 7053.42 |
| Head completion/stabilization protein | C9Y98_13380 | Not Available | Negative | 2793587 - 2794096 | 19088.9 |
| Small terminase subunit | C9Y98_13385 | Not Available | Negative | 2794196 - 2794939 | 27495.7 |
| Major capsid protein precursor | C9Y98_13390 | Not Available | Negative | 2794943 - 2796016 | 40195.7 |
| Capsid scaffold | C9Y98_13395 | Not Available | Negative | 2796075 - 2796929 | 31443.2 |
| Gpp | C9Y98_13400 | Not Available | Positive | 2797103 - 2798875 | 66588.2 |
| Capsid portal protein | C9Y98_13405 | Not Available | Positive | 2798875 - 2799909 | 39170.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





