Escherichia coli strain FWSEC0044

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0044 is a Gram-negative, rod-shaped bacterium known for its facultative anaerobic respiration and mobility, facilitated by the presence of flagella. This strain typically thrives at an optimal temperature of 37°C, falling within a mesophilic temperature range. It is characterized by a cell arrangement in pairs and singles and has two membranes with a single replicon. This strain is associated with a wide variety of hosts, including Homo sapiens (humans), Gallus gallus (chickens), Bos taurus (cattle), and numerous other animals and plants. Its diverse biotic relationships indicate that it can exist freely within these hosts, contributing to its widespread prevalence. FWSEC0044 is clinically significant due to its association with a range of health effects in humans, notably urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). These health issues underscore the strain's pathogenicity, primarily in human hosts. The ecological insight from FWSEC0044’s diverse host range reflects its adaptability and potential for transmission across various species, including both vertebrates and invertebrates. Its role in health and disease highlights the importance of understanding microbial interactions within host environments, particularly in the context of zoonotic infections and food safety.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0044

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0044
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0044


Gene Summary

Adenine Count

1289358 bp

Thymine Count

1292676 bp

Guanine Count

1312885 bp

Cytosine Count

1315459 bp

Genome Length

5222293 bp

Protein-coding Genes

4734 genes

Non-Coding Genes

317 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s2C9Y95_02535Not AvailablePositive526017 - 52674226745.2
elongation factor tsC9Y95_02540Not AvailablePositive526877 - 52772830424.7
ump kinaseC9Y95_02545Not AvailablePositive527875 - 52860025971.9
ribosome recycling factorC9Y95_02550Not AvailablePositive528892 - 52944920639.7
1-deoxy-d-xylulose-5-phosphate reductoisomeraseC9Y95_02555Not AvailablePositive529541 - 53073743390.6
(2e,6e)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthaseC9Y95_02560Not AvailablePositive530926 - 53168428314.5
phosphatidate cytidylyltransferaseC9Y95_02565Not AvailablePositive531697 - 53255431455.6
sigma e protease regulator rsepC9Y95_02570Not AvailablePositive532566 - 53391849074.2
outer membrane protein assembly factor bamaC9Y95_02575Not AvailablePositive533948 - 53638090557.5
chaperone protein skpC9Y95_02580Not AvailablePositive536502 - 53698717689.2

Displaying genes 791 – 800 of 5058 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total