Escherichia coli strain FWSEC0044

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0044 is a Gram-negative, rod-shaped bacterium known for its facultative anaerobic respiration and mobility, facilitated by the presence of flagella. This strain typically thrives at an optimal temperature of 37°C, falling within a mesophilic temperature range. It is characterized by a cell arrangement in pairs and singles and has two membranes with a single replicon. This strain is associated with a wide variety of hosts, including Homo sapiens (humans), Gallus gallus (chickens), Bos taurus (cattle), and numerous other animals and plants. Its diverse biotic relationships indicate that it can exist freely within these hosts, contributing to its widespread prevalence. FWSEC0044 is clinically significant due to its association with a range of health effects in humans, notably urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). These health issues underscore the strain's pathogenicity, primarily in human hosts. The ecological insight from FWSEC0044’s diverse host range reflects its adaptability and potential for transmission across various species, including both vertebrates and invertebrates. Its role in health and disease highlights the importance of understanding microbial interactions within host environments, particularly in the context of zoonotic infections and food safety.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0044

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0044
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0044


Gene Summary

Adenine Count

1289358 bp

Thymine Count

1292676 bp

Guanine Count

1312885 bp

Cytosine Count

1315459 bp

Genome Length

5222293 bp

Protein-coding Genes

4734 genes

Non-Coding Genes

317 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yeah/yhbh family proteinC9Y95_01020Not AvailablePositive207235 - 20851849453.2
ggdef domain-containing proteinC9Y95_01025Not AvailablePositive208665 - 21014056167.8
ggdef domain-containing proteinC9Y95_01030Not AvailablePositive210321 - 21181156606.8
ybak/prolyl-trna synthetase associated domain-containing proteinC9Y95_01035Not AvailablePositive211854 - 21235717865.7
hypothetical proteinC9Y95_01040Not AvailableNegative212358 - 2124623771.77
duf441 domain-containing proteinC9Y95_01045Not AvailablePositive212632 - 21307815256.6
arac family transcriptional regulatorC9Y95_01050Not AvailableNegative213035 - 21385630543.3
mfs transporterC9Y95_01055Not AvailablePositive213953 - 21513441240.9
duf488 domain-containing proteinC9Y95_01060Not AvailablePositive215189 - 21553613370.9
duf333 domain-containing proteinC9Y95_01065Not AvailableNegative215558 - 2158128928.84

Displaying genes 491 – 500 of 5058 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total