Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0044 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289358 bp
Thymine Count
1292676 bp
Guanine Count
1312885 bp
Cytosine Count
1315459 bp
Genome Length
5222293 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
317 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system lee export apparatus protein escv | C9Y95_09525 | Not Available | Positive | 1988936 - 1990963 | 75131.8 |
| type iii secretion system lee atpase escn | C9Y95_09530 | Not Available | Positive | 1990947 - 1992287 | 48819.2 |
| type iii secretion protein | C9Y95_09535 | Not Available | Positive | 1992347 - 1992667 | 12363.7 |
| type iii secretion system lee needle length regulator escp | C9Y95_09540 | Not Available | Positive | 1992660 - 1993076 | 16548.9 |
| type iii secretion system lee ring protein escq | C9Y95_09545 | Not Available | Positive | 1993039 - 1993956 | 34955.8 |
| type iii secretion system lee effector esph | C9Y95_09550 | Not Available | Positive | 1993987 - 1994493 | 19283.0 |
| type iii secretion system lee chaperone cesf | C9Y95_09555 | Not Available | Negative | 1994691 - 1995074 | 14673.4 |
| type iii secretion system lee effector map (rho guanine exchange factor) | C9Y95_09560 | Not Available | Positive | 1995340 - 1995951 | 22953.3 |
| type iii secretion system lee translocated intimin receptor tir | C9Y95_09565 | Not Available | Positive | 1996375 - 1998057 | 58200.0 |
| type iii secretion system lee chaperone cest | C9Y95_09570 | Not Available | Positive | 1998192 - 1998662 | 17681.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




