Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0043 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1285098 bp
Thymine Count
1286106 bp
Guanine Count
1307450 bp
Cytosine Count
1301511 bp
Genome Length
5192615 bp
Protein-coding Genes
4747 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage repressor protein/antirepressor ant | C9Y94_24980 | Not Available | Negative | 5018884 - 5019762 | 33189.5 |
| arc family dna-binding protein | C9Y94_24990 | Not Available | Negative | 5020026 - 5020178 | 5734.09 |
| arc family dna-binding protein | C9Y94_24995 | Not Available | Positive | 5020288 - 5020542 | 9533.47 |
| duf1376 domain-containing protein | C9Y94_25000 | Not Available | Negative | 5020654 - 5021192 | 20513.5 |
| hypothetical protein | C9Y94_25005 | Not Available | Negative | 5021205 - 5021627 | 15707.8 |
| xre family transcriptional regulator | C9Y94_25010 | Not Available | Negative | 5021624 - 5021866 | 8901.58 |
| helix-turn-helix domain-containing protein | C9Y94_25015 | Not Available | Positive | 5021963 - 5022382 | 15951.2 |
| duf1391 domain-containing protein | C9Y94_25020 | Not Available | Positive | 5022688 - 5022840 | 5527.39 |
| lysis protein | C9Y94_25025 | Not Available | Positive | 5022933 - 5023097 | 6187.67 |
| hypothetical protein | C9Y94_25030 | Not Available | Negative | 5023060 - 5023404 | 12958.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




