Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0043 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1285098 bp
Thymine Count
1286106 bp
Guanine Count
1307450 bp
Cytosine Count
1301511 bp
Genome Length
5192615 bp
Protein-coding Genes
4747 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | C9Y94_20540 | Not Available | Negative | 4234668 - 4235246 | 21445.9 |
| yip1 family protein | C9Y94_20545 | Not Available | Positive | 4235416 - 4236003 | 21692.0 |
| d-alanyl-d-alanine endopeptidase | C9Y94_20550 | Not Available | Positive | 4236177 - 4237109 | 33889.4 |
| d-lactate dehydrogenase | C9Y94_20555 | Not Available | Negative | 4237147 - 4238862 | 64572.9 |
| beta-glucosidase bglx | C9Y94_20560 | Not Available | Positive | 4239058 - 4241355 | 83492.8 |
| abc transporter substrate-binding protein | C9Y94_20565 | Not Available | Positive | 4241566 - 4242483 | 32611.1 |
| abc transporter permease | C9Y94_20570 | Not Available | Positive | 4242490 - 4243647 | 41141.1 |
| abc transporter atp-binding protein | C9Y94_20575 | Not Available | Positive | 4243640 - 4244566 | 34426.7 |
| abc transporter permease | C9Y94_20580 | Not Available | Positive | 4244571 - 4245302 | 25530.1 |
| protein yoho | C9Y94_20585 | Not Available | Negative | 4245283 - 4245390 | 3642.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




