Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0043 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1285098 bp
Thymine Count
1286106 bp
Guanine Count
1307450 bp
Cytosine Count
1301511 bp
Genome Length
5192615 bp
Protein-coding Genes
4747 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system lee gatekeeper sepl | C9Y94_18845 | Not Available | Positive | 3924811 - 3925866 | 39954.0 |
| type iii secretion system lee translocon filament protein espa | C9Y94_18850 | Not Available | Positive | 3925924 - 3926502 | 20520.2 |
| type iii secretion system lee translocon pore-forming subunit espd | C9Y94_18855 | Not Available | Positive | 3926515 - 3927639 | 39085.5 |
| type iii secretion system lee translocon pore-forming subunit espb | C9Y94_18860 | Not Available | Positive | 3927660 - 3928598 | 32632.4 |
| type iii secretion system lee chaperone cesd2 | C9Y94_18865 | Not Available | Positive | 3928605 - 3929012 | 15813.8 |
| type iii secretion system lee needle major subunit escf | C9Y94_18870 | Not Available | Positive | 3929048 - 3929269 | 8127.69 |
| type iii secretion system lee needle protein cochaperone escg | C9Y94_18875 | Not Available | Positive | 3929275 - 3929553 | 10280.4 |
| protein espf | C9Y94_18880 | Not Available | Positive | 3929638 - 3930102 | 15650.6 |
| hypothetical protein | C9Y94_18890 | Not Available | Negative | 3930537 - 3930770 | 8560.37 |
| attp region and p4int integrase | C9Y94_18895 | Not Available | Negative | 3931103 - 3931249 | 5590.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




