Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0043 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1285098 bp
Thymine Count
1286106 bp
Guanine Count
1307450 bp
Cytosine Count
1301511 bp
Genome Length
5192615 bp
Protein-coding Genes
4747 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion protein | C9Y94_18795 | Not Available | Positive | 3914005 - 3914325 | 12363.7 |
| type iii secretion system lee needle length regulator escp | C9Y94_18800 | Not Available | Positive | 3914318 - 3914734 | 16548.9 |
| type iii secretion system lee ring protein escq | C9Y94_18805 | Not Available | Positive | 3914697 - 3915614 | 34955.8 |
| type iii secretion system lee effector esph | C9Y94_18810 | Not Available | Positive | 3915645 - 3916151 | 19283.0 |
| type iii secretion system lee chaperone cesf | C9Y94_18815 | Not Available | Negative | 3916349 - 3916732 | 14673.4 |
| type iii secretion system lee effector map (rho guanine exchange factor) | C9Y94_18820 | Not Available | Positive | 3916998 - 3917609 | 22953.3 |
| type iii secretion system lee translocated intimin receptor tir | C9Y94_18825 | Not Available | Positive | 3918033 - 3919715 | 58200.0 |
| type iii secretion system lee chaperone cest | C9Y94_18830 | Not Available | Positive | 3919850 - 3920320 | 17681.9 |
| intimin type gamma | C9Y94_18835 | Not Available | Positive | 3920380 - 3923184 | 101802.0 |
| type iii secretion system lee inner membrane ring protein escd | C9Y94_18840 | Not Available | Negative | 3923448 - 3924668 | 45261.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




