Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0043 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1285098 bp
Thymine Count
1286106 bp
Guanine Count
1307450 bp
Cytosine Count
1301511 bp
Genome Length
5192615 bp
Protein-coding Genes
4747 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system lee transcriptional regulator grla | C9Y94_18745 | Not Available | Positive | 3905458 - 3905871 | 16085.4 |
| type iii secretion system lee chaperone cesd | C9Y94_18750 | Not Available | Negative | 3906255 - 3906710 | 17503.7 |
| type iii secretion system lee outer membrane ring protein escc | C9Y94_18755 | Not Available | Negative | 3906724 - 3908262 | 56201.9 |
| type iii secretion system lee switch protein sepd | C9Y94_18760 | Not Available | Negative | 3908262 - 3908717 | 17562.0 |
| type iii secretion system lee inner membrane ring protein escj | C9Y94_18765 | Not Available | Negative | 3908723 - 3909295 | 20758.1 |
| esci/ysci/hrpb family type iii secretion system inner rod protein | C9Y94_18770 | Not Available | Negative | 3909298 - 3909675 | 13272.8 |
| type iii secretion system lee cytoprotective effector espz | C9Y94_18775 | Not Available | Negative | 3909759 - 3910058 | 9629.54 |
| type iii secretion system lee chaperone cesl | C9Y94_18780 | Not Available | Positive | 3910244 - 3910597 | 13942.8 |
| type iii secretion system lee export apparatus protein escv | C9Y94_18785 | Not Available | Positive | 3910594 - 3912621 | 75131.8 |
| type iii secretion system lee atpase escn | C9Y94_18790 | Not Available | Positive | 3912605 - 3913945 | 48819.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




