Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0043 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1285098 bp
Thymine Count
1286106 bp
Guanine Count
1307450 bp
Cytosine Count
1301511 bp
Genome Length
5192615 bp
Protein-coding Genes
4747 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine/thiamine pyrophosphate abc transporter permease thip | C9Y94_00680 | Not Available | Positive | 148787 - 150397 | 59380.5 |
| thiamine import atp-binding protein thiq | C9Y94_00685 | Not Available | Positive | 150381 - 151079 | 25017.6 |
| deda family protein | C9Y94_00690 | Not Available | Negative | 151193 - 151957 | 28245.8 |
| arabinose operon regulatory protein | C9Y94_00695 | Not Available | Negative | 152043 - 152921 | 33385.8 |
| ribulokinase | C9Y94_00700 | Not Available | Positive | 153260 - 154960 | 61132.7 |
| l-arabinose isomerase | C9Y94_00705 | Not Available | Positive | 154971 - 156473 | 56078.1 |
| l-ribulose-5-phosphate 4-epimerase | C9Y94_00710 | Not Available | Positive | 156642 - 157337 | 25504.3 |
| dna polymerase ii | C9Y94_00715 | Not Available | Positive | 157412 - 159763 | 89986.6 |
| rna polymerase-associated protein rapa | C9Y94_00720 | Not Available | Positive | 159927 - 162833 | 109791.0 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | C9Y94_00725 | Not Available | Positive | 162845 - 163504 | 24862.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




