Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0043 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1285098 bp
Thymine Count
1286106 bp
Guanine Count
1307450 bp
Cytosine Count
1301511 bp
Genome Length
5192615 bp
Protein-coding Genes
4747 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | C9Y94_17630 | Not Available | Negative | 3700605 - 3701735 | 43170.1 |
| excisionase | C9Y94_17635 | Not Available | Negative | 3701713 - 3701961 | 9211.41 |
| hypothetical protein | C9Y94_17640 | Not Available | Negative | 3702026 - 3702165 | 5223.09 |
| type iii secretion system effector arginine glycosyltransferase nleb2 | C9Y94_17645 | Not Available | Positive | 3702367 - 3703347 | 38012.1 |
| t3ss effector nlec domain protein | C9Y94_17650 | Not Available | Positive | 3703408 - 3703671 | 9492.19 |
| hypothetical protein | C9Y94_17655 | Not Available | Positive | 3703694 - 3703825 | 5078.13 |
| type iii effector | C9Y94_17670 | Not Available | Positive | 3704955 - 3705524 | 21341.1 |
| cytochrome b | C9Y94_17685 | Not Available | Negative | 3706869 - 3707399 | 20334.4 |
| metal-binding protein zint | C9Y94_17690 | Not Available | Negative | 3707742 - 3708392 | 24759.1 |
| protein-methionine-sulfoxide reductase heme-binding subunit msrq | C9Y94_17695 | Not Available | Negative | 3708649 - 3709284 | 24069.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




