Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0043 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1285098 bp
Thymine Count
1286106 bp
Guanine Count
1307450 bp
Cytosine Count
1301511 bp
Genome Length
5192615 bp
Protein-coding Genes
4747 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-isopropylmalate synthase | C9Y94_00640 | Not Available | Positive | 139990 - 141561 | 57317.2 |
| 3-isopropylmalate dehydrogenase | C9Y94_00645 | Not Available | Positive | 141561 - 142652 | 39493.2 |
| 3-isopropylmalate dehydratase large subunit | C9Y94_00650 | Not Available | Positive | 142655 - 144055 | 49884.7 |
| 3-isopropylmalate dehydratase small subunit | C9Y94_00655 | Not Available | Positive | 144066 - 144671 | 22530.8 |
| glucose uptake inhibitor sgrt | C9Y94_00660 | Not Available | Negative | 144779 - 144910 | 5440.51 |
| hth-type transcriptional regulator sgrr | C9Y94_00665 | Not Available | Positive | 144999 - 146657 | 64136.9 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 147118 - 147214 | Not Available |
| Ncrna_class:other | Not Available | Not Available | Positive | 147180 - 147363 | Not Available |
| type iii effector | C9Y94_00670 | Not Available | Negative | 146887 - 147456 | 21435.2 |
| thiamine abc transporter substrate binding subunit | C9Y94_00675 | Not Available | Positive | 147828 - 148811 | 36149.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




