Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0043 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1285098 bp
Thymine Count
1286106 bp
Guanine Count
1307450 bp
Cytosine Count
1301511 bp
Genome Length
5192615 bp
Protein-coding Genes
4747 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yhjd | C9Y94_13885 | Not Available | Negative | 2942021 - 2943034 | 37870.6 |
| response regulator transcription factor | C9Y94_13895 | Not Available | Positive | 2944502 - 2945104 | 22605.6 |
| trehalase | C9Y94_13900 | Not Available | Negative | 2945155 - 2946804 | 63700.1 |
| c-type cytochrome | C9Y94_13905 | Not Available | Positive | 2947209 - 2948606 | 51557.3 |
| glutamate decarboxylase | C9Y94_13910 | Not Available | Positive | 2948817 - 2949201 | 14530.0 |
| phage tail protein | C9Y94_13915 | Not Available | Positive | 2949202 - 2949284 | 2954.69 |
| hypothetical protein | C9Y94_13920 | Not Available | Positive | 2949422 - 2949610 | 7482.25 |
| hypothetical protein | C9Y94_13925 | Not Available | Positive | 2949905 - 2951530 | 58960.4 |
| host specificity protein j | C9Y94_13930 | Not Available | Positive | 2951527 - 2952795 | 45499.1 |
| outer membrane protein | C9Y94_13935 | Not Available | Positive | 2952810 - 2953088 | 10475.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




