Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0043 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1285098 bp
Thymine Count
1286106 bp
Guanine Count
1307450 bp
Cytosine Count
1301511 bp
Genome Length
5192615 bp
Protein-coding Genes
4747 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4049 domain-containing protein | C9Y94_12035 | Not Available | Positive | 2561240 - 2562862 | 61257.9 |
| hlyd family secretion protein | C9Y94_12040 | Not Available | Positive | 2563228 - 2564295 | 38858.6 |
| abc transporter atp-binding protein/permease | C9Y94_12045 | Not Available | Positive | 2564292 - 2567027 | 100911.0 |
| inner membrane transport permease yhhj | C9Y94_12050 | Not Available | Positive | 2567027 - 2568151 | 41050.2 |
| type ii toxin-antitoxin system hica family toxin | C9Y94_12055 | Not Available | Positive | 2568224 - 2568499 | 10215.5 |
| type ii toxin-antitoxin system hicb family antitoxin | C9Y94_12060 | Not Available | Positive | 2568496 - 2568855 | 13403.0 |
| class ii aldolase | C9Y94_12065 | Not Available | Negative | 2568905 - 2569765 | 31389.8 |
| hpr family phosphocarrier protein | C9Y94_12070 | Not Available | Negative | 2569797 - 2570066 | 9850.72 |
| carbohydrate kinase | C9Y94_12075 | Not Available | Negative | 2570056 - 2571564 | 55561.6 |
| pts galactitol transporter subunit iic | C9Y94_12080 | Not Available | Negative | 2571557 - 2572915 | 48725.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




