Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0043 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1285098 bp
Thymine Count
1286106 bp
Guanine Count
1307450 bp
Cytosine Count
1301511 bp
Genome Length
5192615 bp
Protein-coding Genes
4747 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase subunit 5 | C9Y94_09440 | Not Available | Negative | 2002346 - 2004055 | 64998.1 |
| hydrogenase 3 membrane subunit | C9Y94_09445 | Not Available | Negative | 2004073 - 2004996 | 33074.4 |
| formate hydrogenlyase subunit 3 | C9Y94_09450 | Not Available | Negative | 2004999 - 2006825 | 64099.1 |
| formate hydrogenlyase subunit 2 | C9Y94_09455 | Not Available | Negative | 2006822 - 2007433 | 21874.4 |
| formate hydrogenlyase regulatory protein hyca | C9Y94_09460 | Not Available | Negative | 2007558 - 2008019 | 17627.9 |
| protein hypa | C9Y94_09465 | Not Available | Positive | 2008231 - 2008581 | 13168.9 |
| hydrogenase isoenzymes nickel incorporation protein hypb | C9Y94_09470 | Not Available | Positive | 2008585 - 2009457 | 31566.8 |
| hydrogenase assembly protein hypc | C9Y94_09475 | Not Available | Positive | 2009448 - 2009720 | 9732.58 |
| hydrogenase formation protein hypd | C9Y94_09480 | Not Available | Positive | 2009720 - 2010841 | 41366.7 |
| hydrogenase expression/formation protein hype | C9Y94_09485 | Not Available | Positive | 2010838 - 2011848 | 35112.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




