Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0043 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1285098 bp
Thymine Count
1286106 bp
Guanine Count
1307450 bp
Cytosine Count
1301511 bp
Genome Length
5192615 bp
Protein-coding Genes
4747 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nupc/nupg family nucleoside cnt transporter | C9Y94_09085 | Not Available | Positive | 1940320 - 1941564 | 43224.1 |
| transcriptional regulator yeil | C9Y94_09090 | Not Available | Negative | 1941637 - 1942335 | 26904.7 |
| ribosylpyrimidine nucleosidase | C9Y94_09095 | Not Available | Positive | 1942465 - 1943406 | 33867.2 |
| phage tail protein | C9Y94_09100 | Not Available | Positive | 1943515 - 1943649 | 5353.84 |
| aldehyde dehydrogenase family protein | C9Y94_09105 | Not Available | Positive | 1943650 - 1944602 | 33381.0 |
| 4-aminobutyrate--2-oxoglutarate transaminase | C9Y94_09110 | Not Available | Positive | 1944616 - 1945896 | 45691.3 |
| gaba permease | C9Y94_09115 | Not Available | Positive | 1946133 - 1947533 | 51069.1 |
| dna-binding transcriptional regulator csir | C9Y94_09120 | Not Available | Positive | 1947554 - 1948216 | 25019.4 |
| peptidoglycan-binding protein lysm | C9Y94_09125 | Not Available | Negative | 1948217 - 1948666 | 16064.0 |
| yqae/pmp3 family membrane protein | C9Y94_09130 | Not Available | Negative | 1948750 - 1948908 | 5865.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




