Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0043 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1285098 bp
Thymine Count
1286106 bp
Guanine Count
1307450 bp
Cytosine Count
1301511 bp
Genome Length
5192615 bp
Protein-coding Genes
4747 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-dehydro-4-deoxy-d-glucuronate isomerase | C9Y94_04105 | Not Available | Negative | 873145 - 873981 | 31078.1 |
| acetyl-coa c-acetyltransferase | C9Y94_04110 | Not Available | Negative | 874268 - 875449 | 41019.2 |
| transporter | C9Y94_04115 | Not Available | Positive | 875704 - 876933 | 45101.9 |
| helix-turn-helix transcriptional regulator | C9Y94_04120 | Not Available | Positive | 877393 - 878025 | 24387.3 |
| yopn family type iii secretion system gatekeeper subunit | C9Y94_04140 | Not Available | Negative | 881648 - 882793 | 43582.6 |
| helix-turn-helix domain-containing protein | C9Y94_04150 | Not Available | Negative | 884498 - 885247 | 28312.5 |
| ghot/ortt family toxin | C9Y94_04155 | Not Available | Negative | 885593 - 885772 | 6642.54 |
| hypothetical protein | C9Y94_04160 | Not Available | Negative | 885839 - 887449 | 60418.6 |
| Trna-gly | Not Available | Not Available | Positive | 887683 - 887756 | Not Available |
| lysm peptidoglycan-binding domain-containing protein | C9Y94_04170 | Not Available | Negative | 887835 - 888590 | 26540.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




