Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper resistance d family protein | C9Y90_03470 | Not Available | Positive | 715251 - 716123 | 32490.2 |
| duf2511 domain-containing protein | C9Y90_03475 | Not Available | Positive | 716136 - 716477 | 12369.1 |
| protein-serine/threonine phosphatase | C9Y90_03480 | Not Available | Positive | 716872 - 717528 | 25229.2 |
| duf1482 family protein | C9Y90_03485 | Not Available | Negative | 717529 - 717720 | 7324.62 |
| duf1480 family protein | C9Y90_03490 | Not Available | Negative | 717825 - 718061 | 8753.26 |
| 16s rrna (cytosine(1407)-c(5))-methyltransferase rsmf | C9Y90_03495 | Not Available | Negative | 718179 - 719618 | 53262.4 |
| pqib family protein | C9Y90_03500 | Not Available | Negative | 719699 - 722332 | 94935.9 |
| paraquat-inducible membrane protein a | C9Y90_03505 | Not Available | Negative | 722301 - 723584 | 48292.4 |
| gaf domain-containing protein | C9Y90_03510 | Not Available | Positive | 723714 - 724211 | 18080.5 |
| rna chaperone proq | C9Y90_03515 | Not Available | Positive | 724308 - 725006 | 25863.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





