Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 687712 - 687787 | Not Available |
| damage-inducible protein dini | C9Y90_03325 | Not Available | Negative | 687877 - 688125 | 9346.04 |
| hydrolase | C9Y90_03330 | Not Available | Negative | 688443 - 689009 | 20457.3 |
| aspartate--trna ligase | C9Y90_03335 | Not Available | Positive | 689319 - 691091 | 65900.3 |
| dihydroneopterin triphosphate diphosphatase | C9Y90_03340 | Not Available | Positive | 691209 - 691661 | 17292.6 |
| yebc/pmpr family dna-binding transcriptional regulator | C9Y90_03345 | Not Available | Positive | 691690 - 692430 | 26424.0 |
| crossover junction endodeoxyribonuclease ruvc | C9Y90_03350 | Not Available | Positive | 692465 - 692986 | 18747.9 |
| yebb family permuted papain-like enzyme | C9Y90_03355 | Not Available | Negative | 692988 - 693590 | 22676.2 |
| hypothetical protein | C9Y90_03360 | Not Available | Positive | 693661 - 693726 | 2699.43 |
| holliday junction branch migration protein ruva | C9Y90_03365 | Not Available | Positive | 693865 - 694476 | 22087.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





