Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine dehydratase | C9Y90_02560 | Not Available | Negative | 533866 - 534855 | 35234.5 |
| transcriptional regulator tdca | C9Y90_02565 | Not Available | Negative | 534954 - 535892 | 34530.8 |
| dna-binding transcriptional activator tdcr | C9Y90_02570 | Not Available | Positive | 536081 - 536425 | 13552.3 |
| hypothetical protein | C9Y90_02575 | Not Available | Positive | 536681 - 537220 | 20602.6 |
| yhac family protein | C9Y90_02580 | Not Available | Positive | 537242 - 538408 | 44480.6 |
| glycerate 2-kinase | C9Y90_02590 | Not Available | Negative | 539216 - 540361 | 39104.6 |
| 2-hydroxy-3-oxopropionate reductase | C9Y90_02595 | Not Available | Negative | 540458 - 541348 | 30661.6 |
| 5-keto-4-deoxy-d-glucarate aldolase | C9Y90_02600 | Not Available | Negative | 541378 - 542148 | 27428.7 |
| mfs transporter | C9Y90_02605 | Not Available | Negative | 542164 - 543498 | 48934.0 |
| galactarate dehydratase | C9Y90_02610 | Not Available | Positive | 543873 - 545444 | 56448.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





