Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | C9Y90_02345 | Not Available | Positive | 488401 - 489834 | 52175.7 |
| protein ygjj | C9Y90_02350 | Not Available | Positive | 489968 - 491038 | 40201.8 |
| alpha-glucosidase | C9Y90_02355 | Not Available | Positive | 491055 - 493406 | 88308.6 |
| nadph-dependent 2,4-dienoyl-coa reductase | C9Y90_02360 | Not Available | Positive | 493732 - 495750 | 72742.6 |
| type ii toxin-antitoxin system higa family antitoxin | C9Y90_02365 | Not Available | Negative | 495795 - 496211 | 14996.3 |
| mrna interferase higb | C9Y90_02370 | Not Available | Negative | 496208 - 496522 | 12103.7 |
| ribosomal rna large subunit methyltransferase g | C9Y90_02375 | Not Available | Negative | 496807 - 497943 | 42286.7 |
| m48 family peptidase | C9Y90_02380 | Not Available | Positive | 498028 - 498531 | 19456.6 |
| vancomycin high temperature exclusion protein | C9Y90_02385 | Not Available | Positive | 498608 - 499300 | 25561.4 |
| gfo/idh/moca family oxidoreductase | C9Y90_02390 | Not Available | Positive | 499379 - 500365 | 36248.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





