Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrogen assimilation transcriptional regulator | C9Y90_01685 | Not Available | Positive | 351205 - 352122 | 32853.1 |
| hth-type transcriptional regulator cbl | C9Y90_01690 | Not Available | Positive | 352224 - 353174 | 35885.0 |
| sel1 repeat family protein | C9Y90_01695 | Not Available | Negative | 353516 - 354118 | 23239.7 |
| rhs repeat protein | C9Y90_01700 | Not Available | Negative | 354121 - 355470 | 52670.4 |
| duf932 domain-containing protein | C9Y90_01705 | Not Available | Positive | 355553 - 355765 | 8116.89 |
| antirestriction protein | C9Y90_01710 | Not Available | Positive | 355856 - 356341 | 18137.3 |
| dna repair protein radc | C9Y90_01715 | Not Available | Positive | 356357 - 356833 | 17674.4 |
| duf987 domain-containing protein | C9Y90_01720 | Not Available | Positive | 356896 - 357117 | 8447.3 |
| type iv toxin-antitoxin system yeeu family antitoxin | C9Y90_01725 | Not Available | Positive | 357280 - 357648 | 13566.1 |
| toxin | C9Y90_01730 | Not Available | Positive | 357738 - 358064 | 12195.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





