Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| colanic acid biosynthesis protein wcam | C9Y90_01340 | Not Available | Positive | 289167 - 290561 | 51202.6 |
| galu regulator galf | C9Y90_01345 | Not Available | Positive | 290736 - 291629 | 32830.2 |
| vi polysaccharide biosynthesis udp-n-acetylglucosamine c-6 dehydrogenase tvib | C9Y90_01350 | Not Available | Positive | 292051 - 293331 | 47665.6 |
| vi polysaccharide biosynthesis udp-n-acetylglucosaminuronic acid c-4 epimerase tvic | C9Y90_01355 | Not Available | Positive | 293368 - 294396 | 37724.6 |
| dtdp-glucose 4,6-dehydratase | C9Y90_01360 | Not Available | Positive | 294399 - 295487 | 41230.1 |
| glucose-1-phosphate thymidylyltransferase | C9Y90_01365 | Not Available | Positive | 295454 - 296353 | 33447.5 |
| degt/dnrj/eryc1/strs family aminotransferase | C9Y90_01370 | Not Available | Positive | 296353 - 297456 | 41409.0 |
| hypothetical protein | C9Y90_01375 | Not Available | Positive | 297453 - 298169 | 27370.6 |
| gnat family n-acetyltransferase | C9Y90_01380 | Not Available | Positive | 298159 - 298581 | 16044.6 |
| o121 family o-antigen polymerase | C9Y90_01385 | Not Available | Positive | 298598 - 300085 | 55325.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





