Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system mrna interferase toxin yafq | C9Y90_26060 | Not Available | Positive | 5121497 - 5121775 | 10801.2 |
| murein l,d-transpeptidase | C9Y90_26065 | Not Available | Positive | 5121931 - 5122671 | 28022.8 |
| class ii glutamine amidotransferase | C9Y90_26070 | Not Available | Negative | 5122642 - 5123409 | 28637.2 |
| phosphoheptose isomerase | C9Y90_26075 | Not Available | Negative | 5123615 - 5124193 | 20816.0 |
| acyl-coa dehydrogenase | C9Y90_26080 | Not Available | Positive | 5124433 - 5126877 | 89201.6 |
| inhibitor of vertebrate lysozyme | C9Y90_26085 | Not Available | Negative | 5126920 - 5127393 | 16873.2 |
| amidohydrolase | C9Y90_26090 | Not Available | Positive | 5127547 - 5128122 | 21681.1 |
| replication protein | C9Y90_26095 | Not Available | Negative | 5128159 - 5129142 | 37935.5 |
| hypothetical protein | C9Y90_26100 | Not Available | Negative | 5129545 - 5129781 | 8470.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





