Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor h | C9Y90_26010 | Not Available | Negative | 5113446 - 5114060 | 22940.2 |
| rna ligase rtcb family protein | C9Y90_26015 | Not Available | Negative | 5114057 - 5115223 | 42588.9 |
| gnat family n-acetyltransferase | C9Y90_26020 | Not Available | Negative | 5115442 - 5115894 | 17561.2 |
| dna polymerase iv | C9Y90_26025 | Not Available | Negative | 5115891 - 5116946 | 39473.2 |
| putative lateral flagellar export/assembly protein lafu | C9Y90_26030 | Not Available | Negative | 5117017 - 5117787 | 28373.2 |
| flagellar type iii secretion system protein flha | C9Y90_26035 | Not Available | Positive | 5117747 - 5119486 | 63209.1 |
| type ii toxin-antitoxin system hica family toxin | C9Y90_26040 | Not Available | Positive | 5119591 - 5119869 | 10187.3 |
| type ii toxin-antitoxin system hicb family antitoxin | C9Y90_26045 | Not Available | Positive | 5119862 - 5120218 | 13400.8 |
| peptidoglycan endopeptidase | C9Y90_26050 | Not Available | Negative | 5120275 - 5121048 | 29736.5 |
| type ii toxin-antitoxin system antitoxin dinj | C9Y90_26055 | Not Available | Positive | 5121234 - 5121494 | 9392.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





