Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| repa leader peptide tap | C9Y90_25905 | Not Available | Negative | 5100768 - 5100842 | 2715.43 |
| replication protein repa | C9Y90_25910 | Not Available | Positive | 5100924 - 5101034 | 4048.88 |
| replication regulatory protein repa2 | C9Y90_25915 | Not Available | Negative | 5101078 - 5101332 | 9406.44 |
| hypothetical protein | C9Y90_25920 | Not Available | Negative | 5101572 - 5101910 | 12673.7 |
| hemolysin expression modulator hha | C9Y90_25925 | Not Available | Negative | 5101948 - 5102157 | 8311.92 |
| endonuclease | C9Y90_25930 | Not Available | Negative | 5102203 - 5102664 | 17781.6 |
| copper resistance protein | C9Y90_25935 | Not Available | Negative | 5102570 - 5102728 | 5677.8 |
| hd family hydrolase | C9Y90_25945 | Not Available | Positive | 5102879 - 5103415 | 20328.7 |
| hypothetical protein | C9Y90_25950 | Not Available | Positive | 5103406 - 5103768 | 13817.5 |
| hypothetical protein | C9Y90_25955 | Not Available | Positive | 5103768 - 5104073 | 12135.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





