Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4035 domain-containing protein | C9Y90_25140 | Not Available | Negative | 4981805 - 4982014 | 7604.94 |
| phage tail protein | C9Y90_25145 | Not Available | Negative | 4982110 - 4982484 | 14036.8 |
| phage tail protein | C9Y90_25150 | Not Available | Negative | 4982499 - 4983215 | 25442.9 |
| duf1378 family protein | C9Y90_25155 | Not Available | Positive | 4983687 - 4983866 | 6774.36 |
| duf826 domain-containing protein | C9Y90_25160 | Not Available | Positive | 4983907 - 4984179 | 9656.32 |
| holin | C9Y90_25165 | Not Available | Positive | 4984256 - 4984471 | 7978.76 |
| hypothetical protein | C9Y90_25170 | Not Available | Positive | 4984475 - 4985032 | 21325.3 |
| hypothetical protein | C9Y90_25175 | Not Available | Positive | 4985075 - 4985231 | 5506.58 |
| duf4035 domain-containing protein | C9Y90_25180 | Not Available | Negative | 4985430 - 4985639 | 7584.96 |
| phage tail protein | C9Y90_25185 | Not Available | Negative | 4985735 - 4986109 | 13892.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





