Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9Y90_24975 | Not Available | Negative | 4958603 - 4959091 | 18217.9 |
| toxin | C9Y90_24980 | Not Available | Negative | 4959088 - 4959462 | 14005.8 |
| type iv toxin-antitoxin system yeeu family antitoxin | C9Y90_24985 | Not Available | Negative | 4959552 - 4959920 | 13642.3 |
| duf987 domain-containing protein | C9Y90_24990 | Not Available | Negative | 4960083 - 4960304 | 8392.15 |
| phage major capsid protein | C9Y90_24995 | Not Available | Positive | 4960427 - 4961070 | 22346.3 |
| hypothetical protein | C9Y90_25000 | Not Available | Positive | 4961115 - 4961336 | 8085.57 |
| dna-binding protein | C9Y90_25010 | Not Available | Positive | 4963155 - 4963391 | 9183.07 |
| duf3596 domain-containing protein | C9Y90_25015 | Not Available | Positive | 4963426 - 4964706 | 48433.3 |
| transporter | C9Y90_25020 | Not Available | Negative | 4964726 - 4964836 | 4038.87 |
| starvation-sensing protein rspb | C9Y90_25025 | Not Available | Negative | 4964894 - 4965442 | 20100.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





