Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | C9Y90_24540 | Not Available | Positive | 4902468 - 4902728 | 9736.61 |
| hypothetical protein | C9Y90_24545 | Not Available | Positive | 4902721 - 4903272 | 20127.8 |
| peptidase | C9Y90_24550 | Not Available | Positive | 4903269 - 4904417 | 41330.5 |
| hypothetical protein | C9Y90_24555 | Not Available | Positive | 4904414 - 4904638 | 8494.52 |
| helix-turn-helix domain-containing protein | C9Y90_24560 | Not Available | Positive | 4904635 - 4905387 | 27474.4 |
| helix-turn-helix domain-containing protein | C9Y90_24565 | Not Available | Negative | 4905408 - 4906349 | 35026.9 |
| duf4222 domain-containing protein | C9Y90_24570 | Not Available | Negative | 4906339 - 4906518 | 7500.92 |
| xre family transcriptional regulator | C9Y90_24585 | Not Available | Negative | 4907243 - 4907503 | 9763.64 |
| helix-turn-helix transcriptional regulator | C9Y90_24595 | Not Available | Positive | 4907601 - 4908293 | 25648.7 |
| hypothetical protein | C9Y90_24600 | Not Available | Positive | 4908571 - 4908867 | 11170.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





