Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t3ss effector protein nled | C9Y90_23020 | Not Available | Negative | 4663629 - 4664327 | 25906.5 |
| duf1076 domain-containing protein | C9Y90_23025 | Not Available | Negative | 4664545 - 4665117 | 20724.9 |
| phage tail protein | C9Y90_23030 | Not Available | Negative | 4665229 - 4665353 | 4576.69 |
| dead/deah box helicase | C9Y90_23175 | Not Available | Negative | 4686357 - 4688717 | 88039.5 |
| inovirus gp2 family protein | C9Y90_23180 | Not Available | Negative | 4688872 - 4689435 | 22435.9 |
| duf3987 domain-containing protein | C9Y90_23190 | Not Available | Negative | 4690256 - 4691689 | 54263.1 |
| duf3987 domain-containing protein | C9Y90_23195 | Not Available | Negative | 4691908 - 4692105 | 7083.89 |
| alpa family transcriptional regulator | C9Y90_23200 | Not Available | Negative | 4692332 - 4692628 | 11020.2 |
| hypothetical protein | C9Y90_23215 | Not Available | Positive | 4693740 - 4695557 | 70846.4 |
| duf4102 domain-containing protein | C9Y90_23220 | Not Available | Negative | 4695744 - 4696946 | 45418.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





