Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is66 family insertion sequence hypothetical protein | C9Y90_22835 | Not Available | Positive | 4619340 - 4619687 | 13043.2 |
| ail/lom family protein | C9Y90_22850 | Not Available | Negative | 4622006 - 4622554 | 20308.4 |
| hypothetical protein | C9Y90_22855 | Not Available | Negative | 4622662 - 4622841 | 7012.58 |
| hypothetical protein | C9Y90_22870 | Not Available | Negative | 4625258 - 4625452 | 7755.58 |
| shet2/espl2 family type iii secretion system effector toxin | C9Y90_22875 | Not Available | Positive | 4625533 - 4627182 | 62159.2 |
| type iii secretion system effector arginine glycosyltransferase nleb | C9Y90_22885 | Not Available | Positive | 4627790 - 4628779 | 37628.6 |
| t3ss effector protein nlee | C9Y90_22890 | Not Available | Positive | 4628828 - 4629502 | 26059.2 |
| lymphostatin efa1/lifa | C9Y90_22900 | Not Available | Positive | 4631365 - 4641036 | 365973.0 |
| is66 family insertion sequence hypothetical protein | C9Y90_22910 | Not Available | Positive | 4641690 - 4642115 | 15919.0 |
| is66 family insertion sequence hypothetical protein | C9Y90_22915 | Not Available | Positive | 4642112 - 4642462 | 13118.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





